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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs138114311 chr6:167577821 A/AC 0.000213 489 16.23 14.9 12.72 KM Plot
THCA rs138179595 chr11:57015392 C/G 8.64E-11 486 15.97 15.9 15.9 KM Plot
THCA rs138201068 chr3:157599038 T/A 0.000242 469 15.97 14.87 33.02 KM Plot
THCA rs138234011 chr5:81279823 T/C 8.87E-5 486 15.9 16.3 17.97 KM Plot
THCA rs138270923 chr5:96206165 T/TA 3.31E-6 487 15.17 16.9 20.83 KM Plot
THCA rs138407022 chr6:79448157 C/T 4.35E-6 487 16.07 15.93 17.15 KM Plot
THCA rs138508328 chr8:12954218 GAAGTTA/G 8.89E-7 486 16.07 13.53 20.87 KM Plot
THCA rs138519211 chr3:127635006 C/CAAAGA 0 490 16.27 15 6.03 KM Plot
THCA rs138522564 chr1:16190241 T/TA 0.00018 488 15.3 17.33 17.77 KM Plot
THCA rs138558849 chr6:46122290 G/GT 4.44E-15 483 15.67 16.97 17.77 KM Plot
THCA rs138605999 chr19:43562022 G/T 0.000237 489 15.3 18.93 10.08 KM Plot
THCA rs138612106 chr6:24428054 A/G 1.29E-11 480 16.37 14.9 7.95 KM Plot
THCA rs138626734 chr11:93827624 T/C 4.95E-5 489 15.33 16.73 8.42 KM Plot
THCA rs138815890 chr5:140963901 TAAGTA/T 0.00012 485 16.13 15.9 15.13 KM Plot
THCA rs138827289 chr7:16467144 CATA/C 1.36E-10 477 15.13 17.28 18.82 KM Plot